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1

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

Chihara, Norio, Madi, Asaf, Kondo, Takaaki, Zhang, Huiyuan, Acharya, Nandini, Singer, Meromit, Nyman, Jackson, Marjanovic, Nemanja D., Kowalczyk, Monika S., Wang, Chao, Kurtulus, Sema, Law, Travis, Et

Journal:

Year:

2018

Language:

english

File:

PDF, 57.48 MB

english, 2018

2

A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells

Singer, Meromit, Wang, Chao, Cong, Le, Marjanovic, Nemanja D., Kowalczyk, Monika S., Zhang, Huiyuan, Nyman, Jackson, Sakuishi, Kaori, Kurtulus, Sema, Gennert, David, Xia, Junrong, Kwon, John Y.H., Nev

Journal:

Year:

2016

Language:

english

File:

PDF, 3.06 MB

english, 2016

3

A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells

Singer, Meromit, Wang, Chao, Cong, Le, Marjanovic, Nemanja D., Kowalczyk, Monika S., Zhang, Huiyuan, Nyman, Jackson, Sakuishi, Kaori, Kurtulus, Sema, Gennert, David, Xia, Junrong, Kwon, John Y.H., Nev

Journal:

Year:

2017

Language:

english

File:

PDF, 1.33 MB

english, 2017

4

Identification and correction of systematic error in high-throughput sequence data

Meacham, Frazer, Boffelli, Dario, Dhahbi, Joseph, Martin, David, Singer, Meromit, Pachter, Lior

Journal:

Bioentrepreneur

Year:

2011

Language:

english

File:

PDF, 1.14 MB

english, 2011

5

Combinatorial prediction of marker panels from single‐cell transcriptomic data

Delaney, Conor, Schnell, Alexandra, Cammarata, Louis V, Yao‐Smith, Aaron, Regev, Aviv, Kuchroo, Vijay K, Singer, Meromit

Journal:

Molecular Systems Biology

Year:

2019

Language:

english

File:

PDF, 2.36 MB

english, 2019

6

Molecular Dissection of CD8 + T-Cell Dysfunction

Wang, Chao, Singer, Meromit, Anderson, Ana C.

Journal:

Trends in Immunology

Year:

2017

Language:

english

File:

PDF, 1.73 MB

english, 2017

7

Purine synthesis promotes maintenance of brain tumor initiating cells in glioma

Wang, Xiuxing, Yang, Kailin, Xie, Qi, Wu, Qiulian, Mack, Stephen C, Shi, Yu, Kim, Leo J Y, Prager, Briana C, Flavahan, William A, Liu, Xiaojing, Singer, Meromit, Hubert, Christopher G, Miller, Tyler E

Journal:

Nature Neuroscience

Year:

2017

Language:

english

File:

PDF, 4.46 MB

english, 2017

8

Identification and correction of systematic error in high-throughput sequence data

Meacham, Frazer, Boffelli, Dario, Dhahbi, Joseph, Martin, David, Singer, Meromit, Pachter, Lior

Journal:

Bioentrepreneur

Year:

2011

File:

PDF, 1.14 MB

2011

9

Nitrogen source interacts with ROP signalling in root hair tip-growth

DARIA BLOCH, GABRIELE MONSHAUSEN, MEROMIT SINGER, SIMON GILROY, SHAUL YALOVSKY

Journal:

Plant, Cell & Environment

Year:

2011

Language:

english

File:

PDF, 2.39 MB

english, 2011

10

A bilateral tumor model identifies transcriptional programs associated with patient response to immune checkpoint blockade

Chen, Ivy X., Newcomer, Kathleen, Pauken, Kristen E., Juneja, Vikram R., Naxerova, Kamila, Wu, Michelle W., Pinter, Matthias, Sen, Debattama R., Singer, Meromit, Sharpe, Arlene H., Jain, Rakesh K.

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 1.28 MB

2020

11

Determining Coding CpG Islands by Identifying Regions Significant for Pattern Statistics on Markov Chains

Singer, Meromit, Engström, Alexander, Schönhuth, Alexander, Pachter, Lior

Journal:

Statistical Applications in Genetics and Molecular Biology

Year:

2011

Language:

english

File:

PDF, 794 KB

english, 2011

12

Combinatorial prediction of marker panels from single‐cell transcriptomic data

Delaney, Conor, Schnell, Alexandra, Cammarata, Louis V, Yao‐Smith, Aaron, Regev, Aviv, Kuchroo, Vijay K, Singer, Meromit

Journal:

Molecular Systems Biology

Year:

2019

File:

PDF, 2.36 MB

2019

13

MetMap Enables Genome-Scale Methyltyping for Determining Methylation States in Populations

Singer, Meromit, Boffelli, Dario, Dhahbi, Joseph, Schönhuth, Alexander, Schroth, Gary P., Martin, David I. K., Pachter, Lior, Wasserman, Wyeth W.

Journal:

PLoS Computational Biology

Year:

2010

Language:

english

File:

PDF, 997 KB

english, 2010

14

Identification and correction of systematic error in high-throughput sequence data

Frazer Meacham, Dario Boffelli, Joseph Dhahbi, David IK Martin, Meromit Singer, Lior Pachter

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 526 KB

english, 2011

15

Controlling for conservation in genome-wide DNA methylation studies

Singer, Meromit, Pachter, Lior

Journal:

Year:

2015

Language:

english

File:

PDF, 1.30 MB

english, 2015

16

Effect of IL-7 Therapy on Phospho-Ribosomal Protein S6 and TRAF1 Expression in HIV-Specific CD8 T Cells in Patients Receiving Antiretroviral Therapy

Wang, Chao, Edilova, Maria I., Wagar, Lisa E., Mujib, Shariq, Singer, Meromit, Bernard, Nicole F., Croughs, Thérèse, Lederman, Michael M., Sereti, Irini, Fischl, Margaret A., Kremmer, Elisabeth, Ostro

Journal:

The Journal of Immunology

Year:

2017

Language:

english

File:

PDF, 953 KB

english, 2017

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